Installation

The tool is designed for users/students/developers that are familiar with HADDOCK, command-line scripting and with access to a HPC infrastructure.

If this is the first time you are using HADDOCK, please familiarize first yourself with the software by running the basic HADDOCK2.4 or HADDOCK3 tutorials.

This tool is not meant to be used by end-users who want to run a single target, or a small set of targets; for that purpose we recommend instead using the HADDOCK2.4 web server.

VERY IMPORTANT: You need to have HADDOCK installed on your system. This is not covered in this documentation. Please refer to the HADDOCK2.4 installation instructions or HADDOCK3.0 repository for more information.

haddock-runner is a standalone open-source software licensed under Apache 2.0 and freely available from the following repository: github.com/haddocking/haddock-runner.

To us it simply download the latest binary from the releases page:

$ wget https://github.com/haddocking/haddock-runner/releases/download/v1.10.0/haddock-runner_1.10.0_linux_386.tar.gz
$ tar -zxvf haddock-runner_1.10.0_linux_386.tar.gz
$ ./haddock-runner -version
haddock-runner version v1.10.0

Alternatively, you can build the latest version from source (you probably don't need to do that), make sure go is installed and run the following commands:

$ git clone https://github.com/haddocking/haddock-runner.git
$ cd haddock-runner
$ go build -o haddock-runner
$ ./haddock-runner -version
haddock-runner version v1.10.0