Python Module Index

h
 
h
haddock
    haddock.clis
    haddock.clis.cli_cfg
    haddock.clis.cli_clean
    haddock.clis.cli_cp
    haddock.clis.cli_dmn
    haddock.clis.cli_mpi
    haddock.clis.cli_pp
    haddock.clis.cli_re
    haddock.clis.cli_restraints
    haddock.clis.cli_score
    haddock.clis.cli_traceback
    haddock.clis.cli_unpack
    haddock.clis.re
    haddock.clis.re.clustfcc
    haddock.clis.re.clustrmsd
    haddock.clis.re.score
    haddock.clis.restraints
    haddock.clis.restraints.active_passive_to_ambig
    haddock.clis.restraints.calc_accessibility
    haddock.clis.restraints.passive_from_active
    haddock.clis.restraints.restrain_bodies
    haddock.clis.restraints.validate_tbl
    haddock.clis.restraints.z_surface_restraints
    haddock.core
    haddock.core.cns_paths
    haddock.core.defaults
    haddock.core.exceptions
    haddock.core.supported_molecules
    haddock.core.typing
    haddock.fcc
    haddock.fcc.calc_fcc_matrix
    haddock.fcc.cluster_fcc
    haddock.gear
    haddock.gear.clean_steps
    haddock.gear.config
    haddock.gear.expandable_parameters
    haddock.gear.greetings
    haddock.gear.haddockmodel
    haddock.gear.known_cns_errors
    haddock.gear.parameters
    haddock.gear.preprocessing
    haddock.gear.restart_run
    haddock.gear.validations
    haddock.gear.yaml2cfg
    haddock.gear.zerofill
    haddock.libs
    haddock.libs.assets
    haddock.libs.libalign
    haddock.libs.libcli
    haddock.libs.libclust
    haddock.libs.libcns
    haddock.libs.libfcc
    haddock.libs.libfunc
    haddock.libs.libhpc
    haddock.libs.libinteractive
    haddock.libs.libio
    haddock.libs.liblog
    haddock.libs.libmath
    haddock.libs.libmpi
    haddock.libs.libontology
    haddock.libs.libparallel
    haddock.libs.libpdb
    haddock.libs.libplots
    haddock.libs.librestraints
    haddock.libs.libstructure
    haddock.libs.libsubprocess
    haddock.libs.libtimer
    haddock.libs.libutil
    haddock.modules
    haddock.modules.analysis
    haddock.modules.analysis.alascan
    haddock.modules.analysis.alascan.scan
    haddock.modules.analysis.caprieval.capri
    haddock.modules.analysis.clustfcc
    haddock.modules.analysis.clustfcc.clustfcc
    haddock.modules.analysis.clustrmsd
    haddock.modules.analysis.clustrmsd.clustrmsd
    haddock.modules.analysis.contactmap
    haddock.modules.analysis.contactmap.contmap
    haddock.modules.analysis.ilrmsdmatrix
    haddock.modules.analysis.ilrmsdmatrix.ilrmsd
    haddock.modules.analysis.rmsdmatrix
    haddock.modules.analysis.rmsdmatrix.rmsd
    haddock.modules.analysis.seletop
    haddock.modules.analysis.seletopclusts
    haddock.modules.analysis.seletopclusts.seletopclusts
    haddock.modules.base_cns_module
    haddock.modules.extras
    haddock.modules.extras.exit
    haddock.modules.refinement
    haddock.modules.refinement.emref
    haddock.modules.refinement.flexref
    haddock.modules.refinement.mdref
    haddock.modules.refinement.openmm
    haddock.modules.sampling
    haddock.modules.sampling.gdock
    haddock.modules.sampling.lightdock
    haddock.modules.sampling.rigidbody
    haddock.modules.scoring
    haddock.modules.scoring.emscoring
    haddock.modules.scoring.mdscoring
    haddock.modules.scoring.sasascore
    haddock.modules.scoring.sasascore.sasascore
    haddock.modules.topology
    haddock.modules.topology.topoaa
    haddock.modules.topology.topocg